WormBase Tree Display for Variation: WBVar00232414
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| WBVar00232414 | Name | Public_name | WBVar00232414 | ||
|---|---|---|---|---|---|
| Other_name | pas44190 | ||||
| snp_C01G12[1] | |||||
| cewivar00101515 | |||||
| C04H5.6a.1:c.834T>C | |||||
| CE15592:p.Pro278= | |||||
| HGVSg | CHROMOSOME_II:g.14560763A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C01G12 | |
| Flanking_sequences | tttaacagcttcgatgaaagcatcacggaatgcgtagaccggcaacgactttctcgtttcttcaattgacattttctttttctcggcttctgtctctactacttcctcattggttccaggcatctgaagagcctgaataaagtccactttctcatcaagcaacagctcaaactcttgctccttccgcttcgcatccttggctcccaggtgaagcatcgaggccatcagctgctcctcttcccactttgcaccatcaccgcctggcctgaagtcctcctcatcatcctccacgtactgtga | gggatctgtttcgttgaggcgtccggcagatgatatctcttcattttcatgacgtcaccggcttttccatgggctttcgtgtattcgagaacttttttccggtactccatatccgctttttcacgtttcgtgagcttctccctagcgaatagagtttgatcatcgtgaactatcgcctccagttcctccagcttgtcgacttttcgttttttcaggtactgccttctggactcctctcggagtttgtccatggaggaaccctctttgtccttgttatcatctcgctttttctccataaca | |||
| Mapping_target | C01G12 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (28) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01384919 | |||
| WBVar01253405 | |||||
| WBVar01320536 | |||||
| WBVar00242918 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003392 | |||
| Transcript | C04H5.6a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C04H5.6a.1:c.834T>C | ||||
| HGVSp | CE15592:p.Pro278= | ||||
| cDNA_position | 837 | ||||
| CDS_position | 834 | ||||
| Protein_position | 278 | ||||
| Exon_number | 2/12 | ||||
| Codon_change | ccT/ccC | ||||
| Amino_acid_change | P | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
