WormBase Tree Display for Variation: WBVar00232017
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| WBVar00232017 | Name | Public_name | WBVar00232017 | ||
|---|---|---|---|---|---|
| Other_name | pas43793 | ||||
| cewivar00611096 | |||||
| Y48B6A.3.1:c.579+178G>A | |||||
| HGVSg | CHROMOSOME_II:g.14156873G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y48B6A | |
| Flanking_sequences | gaagctcatttcgatagtaactgtattactcctggaacaccatttatggctcgactcgccgatgctcttcgatattatattcatgatcgggtcactaatgacgcgtcatgggctaatattgaggtgaatagttggaaattttcgagaatttcgatgaaaaattgactctgacagtccctattttaaggaaattcagtggatttttgttatagaatgtgccggaaaattgccagaaatcaaggaaacatcatttttaattttagcaaaactccaagttacaaaactagctattaacttgat | aaaaaaaagcgaaatctctagtttttacagtgaaaatcctccaatttagttgaaaaactagacaaaacaccgaaaattttgctttattcaagaaagttgagtttttgcccttaaaatcggaaaaataaacttttttccgaacgttctatcacattttcgggtaatttacgtttgaaattgaattttctctctttgaaattcgaaaataaactcaaaatttcattcccaacatggttatggcggcgaaaaatatagtttttacagtgaaaatcgtcgtccattttattttaaaaattggat | |||
| Mapping_target | Y48B6A | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006964 | |||
| Transcript | Y48B6A.3.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48B6A.3.1:c.579+178G>A | ||||
| Intron_number | 3/8 | ||||
| Method | WGS_Pasadena_Quinlan |
