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WormBase Tree Display for Variation: WBVar00232015

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Name Class

WBVar00232015NamePublic_nameWBVar00232015
Other_namepas43791
cewivar00100705
Y48B6A.3.1:c.289-42C>A
HGVSgCHROMOSOME_II:g.14156363C>A
Sequence_detailsSMapS_parentSequenceY48B6A
Flanking_sequencesagaccgcgaagggtaaggaaaatcctcaaaaaatgtggaaatgggtcccaaccacgatccacgtcgcctagggtcgctgctgatgaatttcctgaacaaaaagagcattttccaggcgctagaaaccagcgttttacctagaaaatagtgaaaaatagcgattttcgcgtgaagaactcaatgaaaggtagcaaaacctcaaaaattcaacattttttaagcaaaaagacgcggaatacttcaacacttaacgttaataatcatttttagctttaaaatctactctggaaaaaggtcccgcacatggatttttgctagaaaaaaccccccgtaaattccagcttctctatatggcgatcgatggagttgctccgcgagccaagatgaaccagcagcgaagtcgtcgattccgggcgagtaaagagatggctgaaaaggaggcgagcatcgaagagcaaagaaatcgattgatggccgaaggcatcgctgtgccaccgaaaaagaaagaagaagctcatttcgatagtaactgtattactcctggaacaccatttatggctcgactcgccgatgctcttcgatattatattcatgatcggg
Mapping_targetY48B6A
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006964
TranscriptY48B6A.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48B6A.3.1:c.289-42C>A
Intron_number2/8
MethodWGS_Pasadena_Quinlan