WormBase Tree Display for Variation: WBVar00227309
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WBVar00227309 | Name | Public_name | WBVar00227309 | ||
---|---|---|---|---|---|
Other_name | pas39085 | ||||
cewivar00052695 | |||||
CE21899:p.Gly40= | |||||
Y43F8C.1.1:c.120C>T | |||||
HGVSg | CHROMOSOME_V:g.19607630C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y43F8C | |
Flanking_sequences | atgatcatcgccgatcatcgaaacagattcggcatattgataaaaatgacgtcaccttgaaaattgtatagtataaaatgcgttgattttcttataaacttcaattatttttctacacttttcgagatatttttcaaccaaattttatcgatatcttcttttcccagatttttttttcaatatgcaatcactaattgcgcttctcctgctattagtgtgcttcttacacttggcacagtgccaatggggtggtggatggaataatggaggtggatatggtaacccgtatgggggttatgg | agaggtggaggatatggtggcggatatggaggtaaactaaaaaacgtgtaaaattgaatgtggaatatggtgcattttgtaaattcccagaaatattgagtttgagccaagttatggccgtttgaagtttgtggcatagaaacccaaattctggattttctaggccatcaaaagttaagtaagataaaaatgcgcataattgttcatagatgaatgttatgtatctgaattttgagaaaaaaaaccctgttttgagccaaaatatcgccggtttaagttggtggcctagaaacacaaagt | |||
Mapping_target | Y43F8C | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (30) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003763 | |||
Transcript | Y43F8C.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y43F8C.1.1:c.120C>T | ||||
HGVSp | CE21899:p.Gly40= | ||||
cDNA_position | 1451 | ||||
CDS_position | 120 | ||||
Protein_position | 40 | ||||
Exon_number | 2/4 | ||||
Codon_change | ggC/ggT | ||||
Amino_acid_change | G | ||||
Method | WGS_Pasadena_Quinlan |