WormBase Tree Display for Variation: WBVar00227304
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| WBVar00227304 | Name | Public_name | WBVar00227304 | ||
|---|---|---|---|---|---|
| Other_name | pas39080 | ||||
| cewivar00052684 | |||||
| Y43F8C.1.1:c.-376C>T | |||||
| HGVSg | CHROMOSOME_V:g.19607135C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y43F8C | |
| Flanking_sequences | ttcaatttttcaaaattttgatgcaaaattctgaaagaacatcacataacaatcatttttgtcttttatagtttctcgatatcttcattttccgcggagatatgaaggttcaaagtttggagggtgagagagtatggtggagagggagagcgcagagaggcacacaccctgcgtctctccgccacccacactgtctcgcttcaaaacttcgaacgcgcataacttcttaacggtcagagatatcgaaaaaattcgtaaaagaaaaatgtttagcgcaacattttgcgttcattaagaaaa | ttttcacaaaaagaattcaaatatttagacaattttaggggacaaatgtttttgtcaggtcaaaatgttaatttgatcaagcctttgtgattataacaacgttttccgaccaaaaaaaaagtgtagaattcaccgaatttctccagtttttcggggtaaagtgtaaaattttggaccagaattgtcttgttttaatgatcatcgccgatcatcgaaacagattcggcatattgataaaaatgacgtcaccttgaaaattgtatagtataaaatgcgttgattttcttataaacttcaatt | |||
| Mapping_target | Y43F8C | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (22) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003763 | |||
| Transcript | Y43F8C.1.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8C.1.1:c.-376C>T | ||||
| cDNA_position | 956 | ||||
| Exon_number | 1/4 | ||||
| Method | WGS_Pasadena_Quinlan |
