WormBase Tree Display for Variation: WBVar00226847
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WBVar00226847 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00226847 | |||
Other_name | pas38623 | ||||
uCE5-2967 | |||||
cewivar00051006 | |||||
C14B4.2.1:c.492G>A | |||||
CE40249:p.Ser164= | |||||
C14B4.2.2:c.492G>A | |||||
HGVSg | CHROMOSOME_V:g.19348673C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C14B4 | |
Flanking_sequences | acttggctcaaagtgctccaaataaaaaacgaaccggtttttcagaatttcctcaaaattctaaactgcctagaccctcatattgtgaaattcaaaaaatagtgttttcatggctcaactgggtaagcagatggttgacagttaactggtcaggggttcgagtcacgccagggtcaaaaatttttttcttgattaattttatgaaaaattaccttcaggagtctcccttctcagatttttcgccgtttccgcatcttcccttgggaaaattcttccatcattttgcaatttccgacatat | gacttaaaatcatcagtcgacaataaagcttccgtagaaatcacaatattctgagaatgcacactcagtgagccggagcacgtgatttttgcgtaaacgtgcatagtacctacagtactctctagggtcaaattatgggcttttaggattcccgtgacttccagatttgttccggcaattgtcaactaaaaattaaggcgatttttaatatttttggcctaaaatttttacatctggaattttggtgttgatctccttcacagttgtcttgatttccttctcgtggcccaggccggacgc | |||
Mapping_target | C14B4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (29) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00273457 | |||
Status | Live | ||||
Affects | Gene | WBGene00007583 | |||
Transcript | C14B4.2.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C14B4.2.2:c.492G>A | ||||
HGVSp | CE40249:p.Ser164= | ||||
cDNA_position | 505 | ||||
CDS_position | 492 | ||||
Protein_position | 164 | ||||
Exon_number | 5/18 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
C14B4.2.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C14B4.2.1:c.492G>A | ||||
HGVSp | CE40249:p.Ser164= | ||||
cDNA_position | 568 | ||||
CDS_position | 492 | ||||
Protein_position | 164 | ||||
Exon_number | 6/19 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00005369 | ||||
Method | WGS_Pasadena_Quinlan |