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WormBase Tree Display for Variation: WBVar00225877

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Name Class

WBVar00225877NamePublic_nameWBVar00225877
Other_namepas37653
uCE2-1759
haw131633
cewivar00091947
F18A1.3d.1:c.67-127C>A
F18A1.3l.1:c.67-127C>A
F18A1.3a.1:c.67-127C>A
F18A1.3b.1:c.67-127C>A
F18A1.3i.1:c.67-127C>A
F18A1.3c.1:c.67-127C>A
HGVSgCHROMOSOME_II:g.7680924C>A
Sequence_detailsSMapS_parentSequenceF18A1
Flanking_sequencesatttcagtagtatgataatatcaattcaaatttatttggaaacccctcataaaaacatcacgttgtagatagttcataatatcaattagttatgaatgtattatctccaattttttttctaaatttaatcactgccaagttcaaatatcctcaagatattttaacacctcatccttattttctaatatcttttatccgactcaccagtattttctctttctttctctcgtattcgctcaccttgatcatctacagctcttaccgtaactccgcccctactccgctccacccctatacgcgtcacgcacaaacccgcattcagtggccttcagcctcggagcgctctacctgcgctctcatgtgaaccaacattcttgtttgagctccttctttttcttgtattttttttaatattctgaatttcaggtgaaaaagaatttcgaacgtgtctcgctgctcacacgtctcgaagatcacccgtatcttcgtgatgatcaagatgtcgttcaagacgatacacagtctcaaggaaccgatggaatgcttcttcagctcaatgatgaggaacgacaaaggctaatgaagatgataagcacacct
Mapping_targetF18A1
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (19)
LaboratoryAX
PersonWBPerson6900
WBPerson4037
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Swan
HistoryAcquires_mergeWBVar00551498
WBVar01373709
WBVar00268831
StatusLive
AffectsGeneWBGene00003044
TranscriptF18A1.3l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3l.1:c.67-127C>A
Intron_number2/6
F18A1.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3b.1:c.67-127C>A
Intron_number2/6
F18A1.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3a.1:c.67-127C>A
Intron_number2/5
F18A1.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3c.1:c.67-127C>A
Intron_number2/4
F18A1.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3i.1:c.67-127C>A
Intron_number2/6
F18A1.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3d.1:c.67-127C>A
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00037807
WBPaper00005369
MethodWGS_Pasadena_Quinlan