WormBase Tree Display for Variation: WBVar00220556
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| WBVar00220556 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00220556 | |||
| Other_name | pas32332 | ||||
| Y49F6B.2.1:c.641+198C>T | |||||
| HGVSg | CHROMOSOME_II:g.3504014C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49F6B | |
| Flanking_sequences | cagaagacttttattcgagtagaatggtgcgaaaagagcgaaaaaagacgatggtcgacgagattttgcataatgaggaatcgttgagcaaagccaagaaaaagtacgggaaaatcaagaatttttgtgaaaaaattcaagtttttgcgtttttaacgttaaaatcgtgatttttagagcaaaaatgagctaaaaaggataaaaattggccgattttcacccaaaacggcgaaattttgccaaaaatcctggaaattgatatttttaatgcaaaaactcgctaaaaacggtagaaattga | cgattttcactcaaaacgccgaatttttgccgaaaatcctgtaaatctgcagtttttgcgtttttttaacgtaaaattatgattttggactcgaaaaccccaaaaaaatgctgaaaattgatcgattttcacttgaaacgacgaaatttcgtcgaaaaaacccggaaatggacagttttttacgttttttaacgtaaaattatgattttggagctcaaaattggctaaaattgatggaaaatggtgaattttcgttacaatatggtttttttttaataaaaaaaacattttccaagattt | |||
| Mapping_target | Y49F6B | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| History | Acquires_merge | WBVar01236796 | |||
| WBVar01302975 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021715 | |||
| Transcript | Y49F6B.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y49F6B.2.1:c.641+198C>T | ||||
| Intron_number | 5/6 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
