WormBase Tree Display for Variation: WBVar00220553
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WBVar00220553 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00220553 | |||
Other_name | pas32329 | ||||
cewivar00088376 | |||||
CE25336:p.Thr134= | |||||
Y49F6B.2.1:c.402G>A | |||||
HGVSg | CHROMOSOME_II:g.3503531G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y49F6B | |
Flanking_sequences | cgccaaaagaaggagcttttgaggcagttgacctgctcggaacatcctatttggagccatatgagatggataaggacttgcaggagcttctggaaaagtcagttgtcgggccgaagtttgaaggcgatcatcagcctcaaaataggcttttaggccggaatgcggccgccaggctgaagaaagtgcgttgaaatcgatgaaaattcgattaaaatcgctcaaaatccaataaaaatcgctatttttccagtcagaacgcgaaaaaaccaaaggatccgcttggttcaaccttccagcgac | gagctcaccgatgagcacaaacgagatttggaattccttcaaatgagatcaactctcgatccattggctcattatcgtcgaaatgaccgggctgtactgccgaaatacttccaagttcgagaaaatttaaaaaattcccaaaaaatccgagatttttcaggttggacgagtcgttgacgctccagaagacttttattcgagtagaatggtgcgaaaagagcgaaaaaagacgatggtcgacgagattttgcataatgaggaatcgttgagcaaagccaagaaaaagtacgggaaaatcaa | |||
Mapping_target | Y49F6B | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (54) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01437036 | |||
Status | Live | ||||
Affects | Gene | WBGene00021715 | |||
Transcript | Y49F6B.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y49F6B.2.1:c.402G>A | ||||
HGVSp | CE25336:p.Thr134= | ||||
cDNA_position | 408 | ||||
CDS_position | 402 | ||||
Protein_position | 134 | ||||
Exon_number | 4/7 | ||||
Codon_change | acG/acA | ||||
Amino_acid_change | T | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |