WormBase Tree Display for Variation: WBVar00213620

WBVar00213620 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00213620
    Other_name: haw80896
      haw168935
      cewivar00240274
      CE30091:p.Leu340=
      K07B1.5b.2:c.1026T>A
      K07B1.5b.1:c.1026T>A
      K07B1.5a.2:c.1020T>A
      CE53104:p.Leu342=
      K07B1.5a.1:c.1020T>A
    HGVSg: CHROMOSOME_V:g.9328909A>T
  Sequence_details: SMap: S_parent: Sequence: K07B1
    Flanking_sequences: tgtaaacctcatacatccaatctcg agtttttcttcgtcttcgaatggaa
    Mapping_target: K07B1
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00588800
    Status: Live
  Affects: Gene: WBGene00019465
    Transcript: K07B1.5a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K07B1.5a.2:c.1020T>A
        HGVSp: CE30091:p.Leu340=
        cDNA_position: 1139
        CDS_position: 1020
        Protein_position: 340
        Exon_number: 8/10
        Codon_change: ctT/ctA
        Amino_acid_change: L
      K07B1.5a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K07B1.5a.1:c.1020T>A
        HGVSp: CE30091:p.Leu340=
        cDNA_position: 1055
        CDS_position: 1020
        Protein_position: 340
        Exon_number: 7/9
        Codon_change: ctT/ctA
        Amino_acid_change: L
      K07B1.5b.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K07B1.5b.2:c.1026T>A
        HGVSp: CE53104:p.Leu342=
        cDNA_position: 1102
        CDS_position: 1026
        Protein_position: 342
        Exon_number: 8/10
        Codon_change: ctT/ctA
        Amino_acid_change: L
      K07B1.5b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K07B1.5b.1:c.1026T>A
        HGVSp: CE53104:p.Leu342=
        cDNA_position: 1061
        CDS_position: 1026
        Protein_position: 342
        Exon_number: 7/9
        Codon_change: ctT/ctA
        Amino_acid_change: L
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw80896
  Method: WGS_Hawaiian_Waterston