WormBase Tree Display for Variation: WBVar00212201
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| WBVar00212201 | Name | Public_name | WBVar00212201 | ||
|---|---|---|---|---|---|
| Other_name | uCE5-1562 | ||||
| haw79477 | |||||
| haw168024 | |||||
| cewivar00237794 | |||||
| C50E3.10.1:c.195A>G | |||||
| CE08903:p.Ser65= | |||||
| HGVSg | CHROMOSOME_V:g.7601297T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C50E3 | |
| Flanking_sequences | tttcatgtttggcctcagccactaa | gagttgttccagaactgaattattt | |||
| Mapping_target | C50E3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar00272211 | |||
| WBVar00587889 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016821 | |||
| Transcript | C50E3.10.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C50E3.10.1:c.195A>G | ||||
| HGVSp | CE08903:p.Ser65= | ||||
| cDNA_position | 195 | ||||
| CDS_position | 195 | ||||
| Protein_position | 65 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00005369 | |||||
| Remark | [20081124 db] this Variation was previously named hw79477 | ||||
| Method | WGS_Hawaiian_Waterston |
