WormBase Tree Display for Variation: WBVar00211292
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WBVar00211292 | Name | Public_name | WBVar00211292 | ||
---|---|---|---|---|---|
Other_name | snp_F07G11[1] | ||||
haw78568 | |||||
cewivar00236139 | |||||
F07G11.4.1:c.885A>G | |||||
F07G11.4.4:c.885A>G | |||||
F07G11.4.3:c.885A>G | |||||
F07G11.4.2:c.885A>G | |||||
CE09225:p.Ala295= | |||||
HGVSg | CHROMOSOME_V:g.7293550T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F07G11 | |
Flanking_sequences | acctgacaccatatcttgtaacgac | gcattatagttttccttctgataaa | |||
Mapping_target | F07G11 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (16) | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00244038 | |||
WBVar01460538 | |||||
Status | Live | ||||
Affects | Gene | WBGene00017231 | |||
Transcript | F07G11.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F07G11.4.1:c.885A>G | ||||
HGVSp | CE09225:p.Ala295= | ||||
cDNA_position | 958 | ||||
CDS_position | 885 | ||||
Protein_position | 295 | ||||
Exon_number | 9/12 | ||||
Codon_change | gcA/gcG | ||||
Amino_acid_change | A | ||||
F07G11.4.3 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F07G11.4.3:c.885A>G | ||||
HGVSp | CE09225:p.Ala295= | ||||
cDNA_position | 936 | ||||
CDS_position | 885 | ||||
Protein_position | 295 | ||||
Exon_number | 9/12 | ||||
Codon_change | gcA/gcG | ||||
Amino_acid_change | A | ||||
F07G11.4.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F07G11.4.2:c.885A>G | ||||
HGVSp | CE09225:p.Ala295= | ||||
cDNA_position | 1442 | ||||
CDS_position | 885 | ||||
Protein_position | 295 | ||||
Exon_number | 8/11 | ||||
Codon_change | gcA/gcG | ||||
Amino_acid_change | A | ||||
F07G11.4.4 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F07G11.4.4:c.885A>G | ||||
HGVSp | CE09225:p.Ala295= | ||||
cDNA_position | 935 | ||||
CDS_position | 885 | ||||
Protein_position | 295 | ||||
Exon_number | 9/12 | ||||
Codon_change | gcA/gcG | ||||
Amino_acid_change | A | ||||
Reference | WBPaper00040707 | ||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw78568 | ||||
Method | WGS_Hawaiian_Waterston |