WormBase Tree Display for Variation: WBVar00211164
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| WBVar00211164 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00211164 | |||
| Other_name | haw78440 | ||||
| haw167375 | |||||
| cewivar00235990 | |||||
| CE41221:p.Arg380= | |||||
| F09G2.8b.1:c.1140A>G | |||||
| CE09303:p.Arg342= | |||||
| F09G2.8a.1:c.1026A>G | |||||
| HGVSg | CHROMOSOME_V:g.7189564T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F09G2 | |
| Flanking_sequences | tttgaattgctgcaagatcatgctc | cggcctttcgggttgaatggtccag | |||
| Mapping_target | F09G2 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00587240 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00017316 | |||
| Transcript | F09G2.8a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F09G2.8a.1:c.1026A>G | ||||
| HGVSp | CE09303:p.Arg342= | ||||
| cDNA_position | 1030 | ||||
| CDS_position | 1026 | ||||
| Protein_position | 342 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | cgA/cgG | ||||
| Amino_acid_change | R | ||||
| F09G2.8b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F09G2.8b.1:c.1140A>G | ||||
| HGVSp | CE41221:p.Arg380= | ||||
| cDNA_position | 1158 | ||||
| CDS_position | 1140 | ||||
| Protein_position | 380 | ||||
| Exon_number | 6/7 | ||||
| Codon_change | cgA/cgG | ||||
| Amino_acid_change | R | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw78440 | ||||
| Method | WGS_Hawaiian_Waterston |
