WormBase Tree Display for Variation: WBVar00210511
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| WBVar00210511 | Name | Public_name | WBVar00210511 | ||
|---|---|---|---|---|---|
| Other_name | haw77787 | ||||
| cewivar00235169 | |||||
| T05H4.13d.1:c.*419C>T | |||||
| T05H4.13b.1:c.*141C>T | |||||
| T05H4.13a.1:c.1459-174C>T | |||||
| T05H4.13c.1:c.*512C>T | |||||
| HGVSg | CHROMOSOME_V:g.6427507G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T05H4 | |
| Flanking_sequences | taggaatttgtgaaaaaaaaaagaa | ttaaaaaatagggcgagacggaaga | |||
| Mapping_target | T05H4 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000110 | |||
| Transcript | T05H4.13c.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T05H4.13c.1:c.*512C>T | ||||
| cDNA_position | 2005 | ||||
| Exon_number | 9/9 | ||||
| T05H4.13a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T05H4.13a.1:c.1459-174C>T | ||||
| Intron_number | 8/9 | ||||
| T05H4.13d.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T05H4.13d.1:c.*419C>T | ||||
| cDNA_position | 1915 | ||||
| Exon_number | 10/10 | ||||
| T05H4.13b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T05H4.13b.1:c.*141C>T | ||||
| cDNA_position | 1627 | ||||
| Exon_number | 10/10 | ||||
| Remark | [20081124 db] this Variation was previously named hw77787 | ||||
| Method | WGS_Hawaiian_Waterston |
