WormBase Tree Display for Variation: WBVar00209465
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WBVar00209465 | Name | Public_name | WBVar00209465 | ||
---|---|---|---|---|---|
Other_name (11) | |||||
HGVSg | CHROMOSOME_V:g.5559597C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C18C4 | |
Flanking_sequences | tttaaaaaaattttaaagaaaagtt | ctctgaatgtgacaaattatgctaa | |||
Mapping_target | C18C4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00015964 | |||
WBGene00015968 | |||||
Transcript | C18C4.7e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7e.1:c.-75-2294G>A | ||||
Intron_number | 4/19 | ||||
C18C4.7b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7b.2:c.322-2294G>A | ||||
Intron_number | 5/20 | ||||
C18C4.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7b.1:c.322-2294G>A | ||||
Intron_number | 8/23 | ||||
C18C4.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.1d.1:c.57+641C>T | ||||
Intron_number | 1/9 | ||||
C18C4.7e.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7e.2:c.-75-2294G>A | ||||
Intron_number | 2/17 | ||||
C18C4.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7c.1:c.244-2294G>A | ||||
Intron_number | 3/17 | ||||
C18C4.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7a.1:c.832-2294G>A | ||||
Intron_number | 9/24 | ||||
C18C4.7d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.7d.1:c.-75-2294G>A | ||||
Intron_number | 2/18 | ||||
C18C4.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C18C4.1b.1:c.57+641C>T | ||||
Intron_number | 2/9 | ||||
Remark | [20081124 db] this Variation was previously named hw76741 | ||||
Method | WGS_Hawaiian_Waterston |