WormBase Tree Display for Variation: WBVar00208844
expand all nodes | collapse all nodes | view schema
WBVar00208844 | Name | Public_name | WBVar00208844 | ||
---|---|---|---|---|---|
Other_name | haw76120 | ||||
haw165809 | |||||
cewivar00232991 | |||||
CE38139:p.Thr15= | |||||
C04F5.6.1:c.45A>G | |||||
HGVSg | CHROMOSOME_V:g.5107812T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C04F5 | |
Flanking_sequences | tccaactgtacctgagaaacgatga | gtcgcgactattgccatttcttggc | |||
Mapping_target | C04F5 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01459754 | |||
WBVar00585674 | |||||
Status | Live | ||||
Affects | Gene | WBGene00015448 | |||
Transcript | C04F5.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C04F5.6.1:c.45A>G | ||||
HGVSp | CE38139:p.Thr15= | ||||
cDNA_position | 105 | ||||
CDS_position | 45 | ||||
Protein_position | 15 | ||||
Exon_number | 2/8 | ||||
Codon_change | acA/acG | ||||
Amino_acid_change | T | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
Remark | [20081124 db] this Variation was previously named hw76120 | ||||
Method | WGS_Hawaiian_Waterston |