WormBase Tree Display for Variation: WBVar00208185
expand all nodes | collapse all nodes | view schema
WBVar00208185 | Name | Public_name | WBVar00208185 | ||
---|---|---|---|---|---|
Other_name | snp_F13A2[3] | ||||
haw75461 | |||||
haw165347 | |||||
cewivar00232098 | |||||
F13A2.1.1:c.*57C>T | |||||
HGVSg | CHROMOSOME_V:g.4381737G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F13A2 | |
Flanking_sequences | agaaaactttcaagaatttaagaat | agatgtgggagaagtaatcagttga | |||
Mapping_target | F13A2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00585212 | |||
WBVar00244177 | |||||
Status | Live | ||||
Affects | Gene | WBGene00017410 | |||
Transcript | F13A2.1.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F13A2.1.1:c.*57C>T | ||||
cDNA_position | 280 | ||||
Exon_number | 5/5 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw75461 | ||||
Method | WGS_Hawaiian_Waterston |