WormBase Tree Display for Variation: WBVar00206774
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WBVar00206774 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00206774 | |||
Other_name | haw74050 | ||||
cewivar00229454 | |||||
W08A12.1b.2:c.141+1744G>C | |||||
W08A12.1b.3:c.141+1744G>C | |||||
W08A12.1a.1:c.47+1744G>C | |||||
W08A12.1e.1:c.66+1744G>C | |||||
W08A12.1c.1:c.123+1744G>C | |||||
W08A12.1b.1:c.141+1744G>C | |||||
HGVSg | CHROMOSOME_V:g.3693802G>C | ||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | |
Flanking_sequences | cttcttcttacgacttccgattcat | ctcgctttcgtcacactccgctcgg | |||
Mapping_target | W08A12 | ||||
Type_of_mutation | Substitution | G | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00005835 | From_analysis | WGS_Andersen | |||
WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01458972 | |||
Status | Live | ||||
Affects | Gene | WBGene00021078 | |||
Transcript | W08A12.1b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.3:c.141+1744G>C | ||||
Intron_number | 3/7 | ||||
W08A12.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1a.1:c.47+1744G>C | ||||
Intron_number | 2/7 | ||||
W08A12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1c.1:c.123+1744G>C | ||||
Intron_number | 3/7 | ||||
W08A12.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.2:c.141+1744G>C | ||||
Intron_number | 4/8 | ||||
W08A12.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.1:c.141+1744G>C | ||||
Intron_number | 4/8 | ||||
W08A12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1e.1:c.66+1744G>C | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw74050 | ||||
Method | WGS_Hawaiian_Waterston |