WormBase Tree Display for Variation: WBVar00205530
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| WBVar00205530 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00205530 | |||
| Other_name | haw72806 | ||||
| haw163277 | |||||
| cewivar00227012 | |||||
| F59D6.1a.1:c.-3+1475A>T | |||||
| F59D6.1c.1:c.-3+1475A>T | |||||
| F59D6.1a.2:c.-3+1475A>T | |||||
| HGVSg | CHROMOSOME_V:g.3047665A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F59D6 | |
| Flanking_sequences | ccagtaggaaacttttttaaagact | tatattatctcttatacatattaag | |||
| Mapping_target | F59D6 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00583142 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00019103 | |||
| Transcript | F59D6.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F59D6.1c.1:c.-3+1475A>T | ||||
| Intron_number | 2/5 | ||||
| F59D6.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F59D6.1a.1:c.-3+1475A>T | ||||
| Intron_number | 2/5 | ||||
| F59D6.1a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F59D6.1a.2:c.-3+1475A>T | ||||
| Intron_number | 1/4 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw72806 | ||||
| Method | WGS_Hawaiian_Waterston |
