WormBase Tree Display for Variation: WBVar00204976

WBVar00204976 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00204976
    Other_name: haw72252
      haw162866
      cewivar00225910
      F54E2.3e.1:c.1239+458T>A
      F54E2.3f.1:c.1239+458T>A
      F54E2.3h.1:c.1239+458T>A
      F54E2.3g.1:c.1239+458T>A
    HGVSg: CHROMOSOME_V:g.2801870A>T
  Sequence_details: SMap: S_parent: Sequence: F54E2
    Flanking_sequences: ccaaaactttttcagataagttttc aaacgtttcatcattcaattttgtg
    Mapping_target: F54E2
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00582731
    Status: Live
  Affects: Gene: WBGene00004130
    Transcript: F54E2.3h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54E2.3h.1:c.1239+458T>A
        Intron_number: 6/27
      F54E2.3f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54E2.3f.1:c.1239+458T>A
        Intron_number: 6/25
      F54E2.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54E2.3e.1:c.1239+458T>A
        Intron_number: 6/27
      F54E2.3g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54E2.3g.1:c.1239+458T>A
        Intron_number: 6/28
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw72252
  Method: WGS_Hawaiian_Waterston