WormBase Tree Display for Variation: WBVar00204967
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| WBVar00204967 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00204967 | |||
| Other_name (13) | |||||
| HGVSg | CHROMOSOME_V:g.2796583A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F54E2 | |
| Flanking_sequences | gtcatacgagagtaagttaataatt | taatttaaacaaaaaattctaacaa | |||
| Mapping_target | F54E2 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00582718 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004130 | |||
| WBGene00018824 | |||||
| Transcript | F54E2.3j.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3j.1:c.2403+435T>G | ||||
| Intron_number | 5/19 | ||||
| F54E2.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3d.1:c.2403+435T>G | ||||
| Intron_number | 5/17 | ||||
| F54E2.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3a.1:c.2403+435T>G | ||||
| Intron_number | 5/19 | ||||
| F54E2.2.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.2.1:c.271+15A>C | ||||
| Intron_number | 1/3 | ||||
| F54E2.3i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3i.1:c.2403+435T>G | ||||
| Intron_number | 5/20 | ||||
| F54E2.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3e.1:c.4320+435T>G | ||||
| Intron_number | 13/27 | ||||
| F54E2.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3f.1:c.4320+435T>G | ||||
| Intron_number | 13/25 | ||||
| F54E2.3h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3h.1:c.4320+435T>G | ||||
| Intron_number | 13/27 | ||||
| F54E2.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3c.1:c.2403+435T>G | ||||
| Intron_number | 5/17 | ||||
| F54E2.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F54E2.3g.1:c.4320+435T>G | ||||
| Intron_number | 13/28 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw72243 | ||||
| Method | WGS_Hawaiian_Waterston |
