WormBase Tree Display for Variation: WBVar00204710
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| WBVar00204710 | Name | Public_name | WBVar00204710 | ||
|---|---|---|---|---|---|
| Other_name | haw71986 | ||||
| cewivar00225433 | |||||
| Y45G12B.2c.1:c.60G>A | |||||
| CE51119:p.Lys40= | |||||
| CE51096:p.Lys20= | |||||
| Y45G12B.2b.1:c.120G>A | |||||
| Y45G12B.2a.1:c.591G>A | |||||
| CE21934:p.Lys197= | |||||
| HGVSg | CHROMOSOME_V:g.2697237G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y45G12B | |
| Flanking_sequences | atgacgtcacttttgcgcgaaaaaa | aactacggagccgaatcttcaagcg | |||
| Mapping_target | Y45G12B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021563 | |||
| Transcript | Y45G12B.2c.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y45G12B.2c.1:c.60G>A | ||||
| HGVSp | CE51096:p.Lys20= | ||||
| cDNA_position | 60 | ||||
| CDS_position | 60 | ||||
| Protein_position | 20 | ||||
| Exon_number | 1/2 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| Y45G12B.2b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y45G12B.2b.1:c.120G>A | ||||
| HGVSp | CE51119:p.Lys40= | ||||
| cDNA_position | 120 | ||||
| CDS_position | 120 | ||||
| Protein_position | 40 | ||||
| Exon_number | 2/3 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| Y45G12B.2a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y45G12B.2a.1:c.591G>A | ||||
| HGVSp | CE21934:p.Lys197= | ||||
| cDNA_position | 594 | ||||
| CDS_position | 591 | ||||
| Protein_position | 197 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| Remark | [20081124 db] this Variation was previously named hw71986 | ||||
| Method | WGS_Hawaiian_Waterston |
