WormBase Tree Display for Variation: WBVar00203954
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WBVar00203954 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00203954 | |||
Other_name | haw71230 | ||||
haw162067 | |||||
cewivar00223784 | |||||
CE17691:p.Ile416= | |||||
F22F7.1a.1:c.1248C>T | |||||
CE51032:p.Ile294= | |||||
F22F7.1b.1:c.882C>T | |||||
HGVSg | CHROMOSOME_V:g.2129833C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F22F7 | |
Flanking_sequences | acgattatttggcatcattcggaat | acttatcaattggaatctgaatatg | |||
Mapping_target | F22F7 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00581932 | |||
Status | Live | ||||
Affects | Gene | WBGene00017719 | |||
Transcript | F22F7.1a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F22F7.1a.1:c.1248C>T | ||||
HGVSp | CE17691:p.Ile416= | ||||
cDNA_position | 1249 | ||||
CDS_position | 1248 | ||||
Protein_position | 416 | ||||
Exon_number | 6/7 | ||||
Codon_change | atC/atT | ||||
Amino_acid_change | I | ||||
F22F7.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F22F7.1b.1:c.882C>T | ||||
HGVSp | CE51032:p.Ile294= | ||||
cDNA_position | 882 | ||||
CDS_position | 882 | ||||
Protein_position | 294 | ||||
Exon_number | 3/3 | ||||
Codon_change | atC/atT | ||||
Amino_acid_change | I | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw71230 | ||||
Method | WGS_Hawaiian_Waterston |