WormBase Tree Display for Variation: WBVar00203813
expand all nodes | collapse all nodes | view schema
WBVar00203813 | Name | Public_name | WBVar00203813 | ||
---|---|---|---|---|---|
Other_name | haw71089 | ||||
cewivar00223535 | |||||
Y40B10A.2a.1:c.392-89A>T | |||||
Y40B10A.2b.1:c.269-89A>T | |||||
HGVSg | CHROMOSOME_V:g.2060640A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y40B10A | |
Flanking_sequences | aatttctcctaaaaacatttttttt | aactaaaaatggctgattttgccgc | |||
Mapping_target | Y40B10A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021487 | |||
Transcript | Y40B10A.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y40B10A.2a.1:c.392-89A>T | ||||
Intron_number | 3/5 | ||||
Y40B10A.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40B10A.2b.1:c.269-89A>T | ||||
Intron_number | 1/2 | ||||
Remark | [20081124 db] this Variation was previously named hw71089 | ||||
Method | WGS_Hawaiian_Waterston |