WormBase Tree Display for Variation: WBVar00203610
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WBVar00203610 | Name | Public_name | WBVar00203610 | ||
---|---|---|---|---|---|
Other_name | haw70886 | ||||
cewivar00223241 | |||||
T06A1.4b.1:c.235-121A>G | |||||
T06A1.4a.2:c.409-121A>G | |||||
T06A1.4c.1:c.415-121A>G | |||||
T06A1.4a.1:c.409-121A>G | |||||
HGVSg | CHROMOSOME_V:g.1952846A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T06A1 | |
Flanking_sequences | tggaattttttgtttgcgaaatatc | caaaaacattaaaaaaaatttttta | |||
Mapping_target | T06A1 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020279 | |||
Transcript | T06A1.4a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T06A1.4a.1:c.409-121A>G | ||||
Intron_number | 5/6 | ||||
T06A1.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A1.4c.1:c.415-121A>G | ||||
Intron_number | 3/3 | ||||
T06A1.4a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A1.4a.2:c.409-121A>G | ||||
Intron_number | 6/7 | ||||
T06A1.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A1.4b.1:c.235-121A>G | ||||
Intron_number | 3/3 | ||||
Remark | [20081124 db] this Variation was previously named hw70886 | ||||
Method | WGS_Hawaiian_Waterston |