WormBase Tree Display for Variation: WBVar00201868
expand all nodes | collapse all nodes | view schema
WBVar00201868 | Name | Public_name | WBVar00201868 | ||
---|---|---|---|---|---|
Other_name | haw69144 | ||||
cewivar00221154 | |||||
CE25757:p.Tyr122Ter | |||||
C05E4.2b.1:c.366T>G | |||||
C05E4.2a.1:c.366T>G | |||||
CE50702:p.Tyr122Ter | |||||
HGVSg | CHROMOSOME_V:g.756879T>G | ||||
Sequence_details | SMap | S_parent | Sequence | C05E4 | |
Flanking_sequences | gcatgctatcagtacagtttgtgta | agatactgtgcaatattccatcaat | |||
Mapping_target | C05E4 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006087 | |||
Transcript | C05E4.2a.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | C05E4.2a.1:c.366T>G | ||||
HGVSp | CE25757:p.Tyr122Ter | ||||
cDNA_position | 366 | ||||
CDS_position | 366 | ||||
Protein_position | 122 | ||||
Exon_number | 2/6 | ||||
Codon_change | taT/taG | ||||
Amino_acid_change | Y/* | ||||
C05E4.2b.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | C05E4.2b.1:c.366T>G | ||||
HGVSp | CE50702:p.Tyr122Ter | ||||
cDNA_position | 366 | ||||
CDS_position | 366 | ||||
Protein_position | 122 | ||||
Exon_number | 2/5 | ||||
Codon_change | taT/taG | ||||
Amino_acid_change | Y/* | ||||
Remark | [20081124 db] this Variation was previously named hw69144 | ||||
Method | WGS_Hawaiian_Waterston |