WormBase Tree Display for Variation: WBVar00201433
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WBVar00201433 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00201433 | |||
Other_name | haw68709 | ||||
haw160130 | |||||
cewivar00220727 | |||||
F48G7.11b.1:c.357G>A | |||||
F48G7.11a.1:c.474G>A | |||||
CE35318:p.Glu158= | |||||
CE50799:p.Glu119= | |||||
HGVSg | CHROMOSOME_V:g.641852C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F48G7 | |
Flanking_sequences | caaaagtcattctctccaaactgtt | tcaaattggcaaggagacggaagac | |||
Mapping_target | F48G7 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00579995 | |||
Status | Live | ||||
Affects | Gene | WBGene00018622 | |||
Transcript | F48G7.11a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F48G7.11a.1:c.474G>A | ||||
HGVSp | CE35318:p.Glu158= | ||||
cDNA_position | 546 | ||||
CDS_position | 474 | ||||
Protein_position | 158 | ||||
Exon_number | 6/9 | ||||
Codon_change | gaG/gaA | ||||
Amino_acid_change | E | ||||
F48G7.11b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F48G7.11b.1:c.357G>A | ||||
HGVSp | CE50799:p.Glu119= | ||||
cDNA_position | 357 | ||||
CDS_position | 357 | ||||
Protein_position | 119 | ||||
Exon_number | 4/6 | ||||
Codon_change | gaG/gaA | ||||
Amino_acid_change | E | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw68709 | ||||
Method | WGS_Hawaiian_Waterston |