WormBase Tree Display for Variation: WBVar00200621

WBVar00200621 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00200621
    Other_name: haw67897
      haw159548
      cewivar00219121
      Y108G3AL.1b.1:c.794+39A>T
      Y108G3AL.1a.1:c.974+39A>T
      Y108G3AL.1a.2:c.974+39A>T
    HGVSg: CHROMOSOME_V:g.179425A>T
  Sequence_details: SMap: S_parent: Sequence: Y108G3AL
    Flanking_sequences: gcgatttttttttagaaattgaatt tttggtgattacagccgtgggagga
    Mapping_target: Y108G3AL
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00579413
    Status: Live
  Affects: Gene: WBGene00000838
    Transcript: Y108G3AL.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y108G3AL.1b.1:c.794+39A>T
        Intron_number: 1/4
      Y108G3AL.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y108G3AL.1a.2:c.974+39A>T
        Intron_number: 4/8
      Y108G3AL.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y108G3AL.1a.1:c.974+39A>T
        Intron_number: 3/7
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw67897
  Method: WGS_Hawaiian_Waterston