WormBase Tree Display for Variation: WBVar00199942
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WBVar00199942 | Name | Public_name | WBVar00199942 | ||
---|---|---|---|---|---|
Other_name | haw67218 | ||||
cewivar00218418 | |||||
Y116A8C.16a.1:c.3178+28A>T | |||||
Y116A8C.16b.1:c.268-1663A>T | |||||
Y116A8C.16f.1:c.1387+28A>T | |||||
Y116A8C.16e.1:c.2233+28A>T | |||||
Y116A8C.16c.1:c.3184+28A>T | |||||
HGVSg | CHROMOSOME_IV:g.17012753A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y116A8C | |
Flanking_sequences | gagtttctggaaaattgaaaaaaaa | ttttttcaatttttcaaaaaaaaaa | |||
Mapping_target | Y116A8C | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004403 | |||
Transcript | Y116A8C.16a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8C.16a.1:c.3178+28A>T | ||||
Intron_number | 12/14 | ||||
Y116A8C.16b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8C.16b.1:c.268-1663A>T | ||||
Intron_number | 1/1 | ||||
Y116A8C.16c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8C.16c.1:c.3184+28A>T | ||||
Intron_number | 12/14 | ||||
Y116A8C.16f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8C.16f.1:c.1387+28A>T | ||||
Intron_number | 3/4 | ||||
Y116A8C.16e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8C.16e.1:c.2233+28A>T | ||||
Intron_number | 5/6 | ||||
Remark | [20081124 db] this Variation was previously named hw67218 | ||||
Method | WGS_Hawaiian_Waterston |