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WormBase Tree Display for Variation: WBVar00199942

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Name Class

WBVar00199942NamePublic_nameWBVar00199942
Other_namehaw67218
cewivar00218418
Y116A8C.16a.1:c.3178+28A>T
Y116A8C.16b.1:c.268-1663A>T
Y116A8C.16f.1:c.1387+28A>T
Y116A8C.16e.1:c.2233+28A>T
Y116A8C.16c.1:c.3184+28A>T
HGVSgCHROMOSOME_IV:g.17012753A>T
Sequence_detailsSMapS_parentSequenceY116A8C
Flanking_sequencesgagtttctggaaaattgaaaaaaaattttttcaatttttcaaaaaaaaaa
Mapping_targetY116A8C
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00006631From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004403
TranscriptY116A8C.16a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116A8C.16a.1:c.3178+28A>T
Intron_number12/14
Y116A8C.16b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116A8C.16b.1:c.268-1663A>T
Intron_number1/1
Y116A8C.16c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116A8C.16c.1:c.3184+28A>T
Intron_number12/14
Y116A8C.16f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116A8C.16f.1:c.1387+28A>T
Intron_number3/4
Y116A8C.16e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116A8C.16e.1:c.2233+28A>T
Intron_number5/6
Remark[20081124 db] this Variation was previously named hw67218
MethodWGS_Hawaiian_Waterston