WormBase Tree Display for Variation: WBVar00199758
expand all nodes | collapse all nodes | view schema
WBVar00199758 | Name | Public_name | WBVar00199758 | ||
---|---|---|---|---|---|
Other_name | haw67034 | ||||
cewivar00218193 | |||||
T06A10.1b.2:c.-46+568C>T | |||||
T06A10.1c.1:c.1701+568C>T | |||||
T06A10.1b.1:c.-46+568C>T | |||||
T06A10.1a.1:c.2436+568C>T | |||||
T06A10.1b.4:c.-46+568C>T | |||||
T06A10.1b.3:c.-46+568C>T | |||||
HGVSg | CHROMOSOME_IV:g.16857762G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T06A10 | |
Flanking_sequences | aaatgtaaagattgctgaattttgc | acttttgcatcaaaatttcatcaaa | |||
Mapping_target | T06A10 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020284 | |||
Transcript | T06A10.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1c.1:c.1701+568C>T | ||||
Intron_number | 3/4 | ||||
T06A10.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.2:c.-46+568C>T | ||||
Intron_number | 7/10 | ||||
T06A10.1b.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.4:c.-46+568C>T | ||||
Intron_number | 1/4 | ||||
T06A10.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1a.1:c.2436+568C>T | ||||
Intron_number | 9/11 | ||||
T06A10.1b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.3:c.-46+568C>T | ||||
Intron_number | 3/6 | ||||
T06A10.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.1:c.-46+568C>T | ||||
Intron_number | 7/10 | ||||
Remark | [20081124 db] this Variation was previously named hw67034 | ||||
Method | WGS_Hawaiian_Waterston |