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WormBase Tree Display for Variation: WBVar00199754

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Name Class

WBVar00199754EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00199754
Other_namehaw67030
haw159030
cewivar00218189
T06A10.1b.2:c.-45-351T>C
T06A10.1b.1:c.-45-351T>C
T06A10.1a.1:c.2437-351T>C
T06A10.1c.1:c.1702-351T>C
T06A10.1b.4:c.-45-351T>C
T06A10.1b.3:c.-45-351T>C
HGVSgCHROMOSOME_IV:g.16856708A>G
Sequence_detailsSMapS_parentSequenceT06A10
Flanking_sequencesgctttaaaaaaatgaaaatttgattaaaatcaacttcggaccggaaaaat
Mapping_targetT06A10
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00578895
StatusLive
AffectsGeneWBGene00020284
TranscriptT06A10.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A10.1c.1:c.1702-351T>C
Intron_number3/4
T06A10.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A10.1b.2:c.-45-351T>C
Intron_number7/10
T06A10.1b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A10.1b.4:c.-45-351T>C
Intron_number1/4
T06A10.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A10.1a.1:c.2437-351T>C
Intron_number9/11
T06A10.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A10.1b.3:c.-45-351T>C
Intron_number3/6
T06A10.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06A10.1b.1:c.-45-351T>C
Intron_number7/10
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw67030
MethodWGS_Hawaiian_Waterston