WormBase Tree Display for Variation: WBVar00199754
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WBVar00199754 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00199754 | |||
Other_name | haw67030 | ||||
haw159030 | |||||
cewivar00218189 | |||||
T06A10.1b.2:c.-45-351T>C | |||||
T06A10.1b.1:c.-45-351T>C | |||||
T06A10.1a.1:c.2437-351T>C | |||||
T06A10.1c.1:c.1702-351T>C | |||||
T06A10.1b.4:c.-45-351T>C | |||||
T06A10.1b.3:c.-45-351T>C | |||||
HGVSg | CHROMOSOME_IV:g.16856708A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T06A10 | |
Flanking_sequences | gctttaaaaaaatgaaaatttgatt | aaaatcaacttcggaccggaaaaat | |||
Mapping_target | T06A10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00578895 | |||
Status | Live | ||||
Affects | Gene | WBGene00020284 | |||
Transcript | T06A10.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1c.1:c.1702-351T>C | ||||
Intron_number | 3/4 | ||||
T06A10.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.2:c.-45-351T>C | ||||
Intron_number | 7/10 | ||||
T06A10.1b.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.4:c.-45-351T>C | ||||
Intron_number | 1/4 | ||||
T06A10.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1a.1:c.2437-351T>C | ||||
Intron_number | 9/11 | ||||
T06A10.1b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.3:c.-45-351T>C | ||||
Intron_number | 3/6 | ||||
T06A10.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06A10.1b.1:c.-45-351T>C | ||||
Intron_number | 7/10 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw67030 | ||||
Method | WGS_Hawaiian_Waterston |