WormBase Tree Display for Variation: WBVar00199750
expand all nodes | collapse all nodes | view schema
WBVar00199750 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00199750 | |||
Other_name | haw67026 | ||||
haw159026 | |||||
cewivar00218185 | |||||
Y116A8A.9c.1:c.639+226C>T | |||||
Y116A8A.9b.1:c.711+226C>T | |||||
Y116A8A.9a.1:c.639+226C>T | |||||
HGVSg | CHROMOSOME_IV:g.16851307G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y116A8A | |
Flanking_sequences | aatttgggggattcgccaaaaaaaa | tcattgtgaaatgtaatttttgaaa | |||
Mapping_target | Y116A8A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00578891 | |||
Status | Live | ||||
Affects | Gene | WBGene00003130 | |||
Transcript | Y116A8A.9b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8A.9b.1:c.711+226C>T | ||||
Intron_number | 5/6 | ||||
Y116A8A.9a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8A.9a.1:c.639+226C>T | ||||
Intron_number | 5/7 | ||||
Y116A8A.9c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y116A8A.9c.1:c.639+226C>T | ||||
Intron_number | 4/4 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw67026 | ||||
Method | WGS_Hawaiian_Waterston |