WormBase Tree Display for Variation: WBVar00197266
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WBVar00197266 | Name | Public_name | WBVar00197266 | ||
---|---|---|---|---|---|
Other_name | haw64542 | ||||
cewivar00215192 | |||||
Y73F8A.25a.1:c.1890+1331T>G | |||||
Y73F8A.25a.2:c.1890+1331T>G | |||||
Y73F8A.25d.1:c.1830+1391T>G | |||||
Y73F8A.25e.1:c.648+1391T>G | |||||
Y73F8A.25b.1:c.939+1331T>G | |||||
HGVSg | CHROMOSOME_IV:g.15459954A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y73F8A | |
Flanking_sequences | ggtgtattttaatcctaaaaatcgc | aattttcacgtttgactctcagtaa | |||
Mapping_target | Y73F8A | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013530 | |||
Transcript | Y73F8A.25b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25b.1:c.939+1331T>G | ||||
Intron_number | 6/6 | ||||
Y73F8A.25a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25a.2:c.1890+1331T>G | ||||
Intron_number | 9/10 | ||||
Y73F8A.25a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25a.1:c.1890+1331T>G | ||||
Intron_number | 9/11 | ||||
Y73F8A.25e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25e.1:c.648+1391T>G | ||||
Intron_number | 3/3 | ||||
Y73F8A.25d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y73F8A.25d.1:c.1830+1391T>G | ||||
Intron_number | 9/10 | ||||
Remark | [20081124 db] this Variation was previously named hw64542 | ||||
Method | WGS_Hawaiian_Waterston |