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WormBase Tree Display for Variation: WBVar00197263

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Name Class

WBVar00197263EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00197263
Other_namehaw64539
haw157583
cewivar00215187
Y73F8A.25a.2:c.1891-1199A>T
Y73F8A.25e.1:c.648+2015A>T
Y73F8A.25b.1:c.940-1199A>T
Y73F8A.25a.1:c.1891-1199A>T
Y73F8A.25d.1:c.1830+2015A>T
HGVSgCHROMOSOME_IV:g.15459330T>A
Sequence_detailsSMapS_parentSequenceY73F8A
Flanking_sequencesaaatcgataaaaattcggcaaaaatagagattttgaagcagaggtgggcg
Mapping_targetY73F8A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00577448
StatusLive
AffectsGeneWBGene00013530
TranscriptY73F8A.25b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25b.1:c.940-1199A>T
Intron_number6/6
Y73F8A.25a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.2:c.1891-1199A>T
Intron_number9/10
Y73F8A.25a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.1:c.1891-1199A>T
Intron_number9/11
Y73F8A.25e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25e.1:c.648+2015A>T
Intron_number3/3
Y73F8A.25d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25d.1:c.1830+2015A>T
Intron_number9/10
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw64539
MethodWGS_Hawaiian_Waterston