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WormBase Tree Display for Variation: WBVar00197262

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Name Class

WBVar00197262EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00197262
Other_namehaw64538
haw157582
cewivar00215186
Y73F8A.25a.2:c.1891-1175T>C
Y73F8A.25e.1:c.648+2039T>C
Y73F8A.25b.1:c.940-1175T>C
Y73F8A.25d.1:c.1830+2039T>C
Y73F8A.25a.1:c.1891-1175T>C
HGVSgCHROMOSOME_IV:g.15459306A>G
Sequence_detailsSMapS_parentSequenceY73F8A
Flanking_sequencestattttcggaagaaaaactatgaaaatcgataaaaattcggcaaaaatta
Mapping_targetY73F8A
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00577447
StatusLive
AffectsGeneWBGene00013530
TranscriptY73F8A.25b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25b.1:c.940-1175T>C
Intron_number6/6
Y73F8A.25a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.2:c.1891-1175T>C
Intron_number9/10
Y73F8A.25a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25a.1:c.1891-1175T>C
Intron_number9/11
Y73F8A.25e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25e.1:c.648+2039T>C
Intron_number3/3
Y73F8A.25d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY73F8A.25d.1:c.1830+2039T>C
Intron_number9/10
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw64538
MethodWGS_Hawaiian_Waterston