WormBase Tree Display for Variation: WBVar00196309
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| WBVar00196309 | Name | Public_name | WBVar00196309 | ||
|---|---|---|---|---|---|
| Other_name | haw63585 | ||||
| cewivar00214010 | |||||
| Y41E3.7a.1:c.248+843A>T | |||||
| Y41E3.7h.1:c.248+843A>T | |||||
| Y41E3.7f.1:c.249-23A>T | |||||
| Y41E3.7b.1:c.248+843A>T | |||||
| HGVSg | CHROMOSOME_IV:g.15015232A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
| Flanking_sequences | ataacctattttatggcaattttgc | cctcaaatagagccgttttcagcga | |||
| Mapping_target | Y41E3 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012765 | |||
| Transcript | Y41E3.7b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.7b.1:c.248+843A>T | ||||
| Intron_number | 3/7 | ||||
| Y41E3.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.7a.1:c.248+843A>T | ||||
| Intron_number | 4/10 | ||||
| Y41E3.7f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.7f.1:c.249-23A>T | ||||
| Intron_number | 4/5 | ||||
| Y41E3.7h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.7h.1:c.248+843A>T | ||||
| Intron_number | 4/11 | ||||
| Remark | [20081124 db] this Variation was previously named hw63585 | ||||
| Method | WGS_Hawaiian_Waterston |
