WormBase Tree Display for Variation: WBVar00193601

WBVar00193601 Name: Public_name: WBVar00193601
    Other_name: haw60877
      cewivar00210758
      F52G2.2d.1:c.2581-248A>T
      F52G2.2b.1:c.3355-248A>T
      F52G2.2a.1:c.3925-248A>T
      F52G2.2c.1:c.1219-248A>T
    HGVSg: CHROMOSOME_IV:g.13522378T>A
  Sequence_details: SMap: S_parent: Sequence: F52G2
    Flanking_sequences: gaaaaaggagaaaattttttttttt aattgagaaaagaccggaaaatata
    Mapping_target: F52G2
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00022899 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00004681
    Transcript: F52G2.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F52G2.2a.1:c.3925-248A>T
        Intron_number: 20/21
      F52G2.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F52G2.2d.1:c.2581-248A>T
        Intron_number: 13/13
      F52G2.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F52G2.2b.1:c.3355-248A>T
        Intron_number: 17/17
      F52G2.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F52G2.2c.1:c.1219-248A>T
        Intron_number: 5/5
  Remark: [20081124 db] this Variation was previously named hw60877
  Method: WGS_Hawaiian_Waterston