WormBase Tree Display for Variation: WBVar00193429
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WBVar00193429 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00193429 | |||
Other_name | haw60705 | ||||
haw155380 | |||||
cewivar00210463 | |||||
Y62E10A.13b.1:c.47+400C>T | |||||
Y62E10A.13c.2:c.-2+400C>T | |||||
Y62E10A.13e.1:c.47+400C>T | |||||
Y62E10A.13c.1:c.-2+2439C>T | |||||
Y62E10A.13a.1:c.38+2439C>T | |||||
HGVSg | CHROMOSOME_IV:g.13396282G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y62E10A | |
Flanking_sequences | gaaattacctctcgtttccgagata | tctttgattttctaatttttttttt | |||
Mapping_target | Y62E10A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00575245 | |||
Status | Live | ||||
Affects | Gene | WBGene00013379 | |||
Transcript | Y62E10A.13e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13e.1:c.47+400C>T | ||||
Intron_number | 1/3 | ||||
Y62E10A.13c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13c.1:c.-2+2439C>T | ||||
Intron_number | 1/5 | ||||
Y62E10A.13c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13c.2:c.-2+400C>T | ||||
Intron_number | 1/5 | ||||
Y62E10A.13a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13a.1:c.38+2439C>T | ||||
Intron_number | 2/5 | ||||
Y62E10A.13b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13b.1:c.47+400C>T | ||||
Intron_number | 2/5 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw60705 | ||||
Method | WGS_Hawaiian_Waterston |