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WormBase Tree Display for Variation: WBVar00193429

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Name Class

WBVar00193429EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00193429
Other_namehaw60705
haw155380
cewivar00210463
Y62E10A.13b.1:c.47+400C>T
Y62E10A.13c.2:c.-2+400C>T
Y62E10A.13e.1:c.47+400C>T
Y62E10A.13c.1:c.-2+2439C>T
Y62E10A.13a.1:c.38+2439C>T
HGVSgCHROMOSOME_IV:g.13396282G>A
Sequence_detailsSMapS_parentSequenceY62E10A
Flanking_sequencesgaaattacctctcgtttccgagatatctttgattttctaatttttttttt
Mapping_targetY62E10A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00575245
StatusLive
AffectsGeneWBGene00013379
TranscriptY62E10A.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13e.1:c.47+400C>T
Intron_number1/3
Y62E10A.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13c.1:c.-2+2439C>T
Intron_number1/5
Y62E10A.13c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13c.2:c.-2+400C>T
Intron_number1/5
Y62E10A.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13a.1:c.38+2439C>T
Intron_number2/5
Y62E10A.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13b.1:c.47+400C>T
Intron_number2/5
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw60705
MethodWGS_Hawaiian_Waterston