WormBase Tree Display for Variation: WBVar00193428
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WBVar00193428 | Name | Public_name | WBVar00193428 | ||
---|---|---|---|---|---|
Other_name | haw60704 | ||||
cewivar00210462 | |||||
Y62E10A.13b.1:c.47+513T>A | |||||
Y62E10A.13e.1:c.47+513T>A | |||||
Y62E10A.13c.1:c.-2+2552T>A | |||||
Y62E10A.13c.2:c.-2+513T>A | |||||
Y62E10A.13a.1:c.38+2552T>A | |||||
HGVSg | CHROMOSOME_IV:g.13396169A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y62E10A | |
Flanking_sequences | gtcaatttatgttggaaatattgcc | attgaaaaaaaaagcgagctgcgta | |||
Mapping_target | Y62E10A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013379 | |||
Transcript | Y62E10A.13e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13e.1:c.47+513T>A | ||||
Intron_number | 1/3 | ||||
Y62E10A.13c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13c.1:c.-2+2552T>A | ||||
Intron_number | 1/5 | ||||
Y62E10A.13c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13c.2:c.-2+513T>A | ||||
Intron_number | 1/5 | ||||
Y62E10A.13a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13a.1:c.38+2552T>A | ||||
Intron_number | 2/5 | ||||
Y62E10A.13b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13b.1:c.47+513T>A | ||||
Intron_number | 2/5 | ||||
Remark | [20081124 db] this Variation was previously named hw60704 | ||||
Method | WGS_Hawaiian_Waterston |