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WormBase Tree Display for Variation: WBVar00193428

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Name Class

WBVar00193428NamePublic_nameWBVar00193428
Other_namehaw60704
cewivar00210462
Y62E10A.13b.1:c.47+513T>A
Y62E10A.13e.1:c.47+513T>A
Y62E10A.13c.1:c.-2+2552T>A
Y62E10A.13c.2:c.-2+513T>A
Y62E10A.13a.1:c.38+2552T>A
HGVSgCHROMOSOME_IV:g.13396169A>T
Sequence_detailsSMapS_parentSequenceY62E10A
Flanking_sequencesgtcaatttatgttggaaatattgccattgaaaaaaaaagcgagctgcgta
Mapping_targetY62E10A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013379
TranscriptY62E10A.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13e.1:c.47+513T>A
Intron_number1/3
Y62E10A.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13c.1:c.-2+2552T>A
Intron_number1/5
Y62E10A.13c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13c.2:c.-2+513T>A
Intron_number1/5
Y62E10A.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13a.1:c.38+2552T>A
Intron_number2/5
Y62E10A.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13b.1:c.47+513T>A
Intron_number2/5
Remark[20081124 db] this Variation was previously named hw60704
MethodWGS_Hawaiian_Waterston