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WormBase Tree Display for Variation: WBVar00193341

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Name Class

WBVar00193341EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00193341
Other_namehaw60617
haw155326
cewivar00210346
Y67H2A.7b.1:c.-79-139T>A
Y67H2A.7b.3:c.-79-139T>A
Y67H2A.7b.2:c.-79-139T>A
Y67H2A.7a.1:c.597-139T>A
Y67H2A.7b.4:c.-218T>A
HGVSgCHROMOSOME_IV:g.13307199T>A
Sequence_detailsSMapS_parentSequenceY67H2A
Flanking_sequencesgcgcgccgaggtgtgtcgttttttgtttttcaatgttttttttagggaaa
Mapping_targetY67H2A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00575191
StatusLive
AffectsGeneWBGene00013464
TranscriptY67H2A.7b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67H2A.7b.2:c.-79-139T>A
Intron_number2/8
Y67H2A.7b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67H2A.7b.1:c.-79-139T>A
Intron_number3/9
Y67H2A.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67H2A.7a.1:c.597-139T>A
Intron_number5/10
Y67H2A.7b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY67H2A.7b.3:c.-79-139T>A
Intron_number1/7
Y67H2A.7b.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY67H2A.7b.4:c.-218T>A
cDNA_position87
Exon_number1/7
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw60617
MethodWGS_Hawaiian_Waterston