WormBase Tree Display for Variation: WBVar00193341
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WBVar00193341 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00193341 | |||
Other_name | haw60617 | ||||
haw155326 | |||||
cewivar00210346 | |||||
Y67H2A.7b.1:c.-79-139T>A | |||||
Y67H2A.7b.3:c.-79-139T>A | |||||
Y67H2A.7b.2:c.-79-139T>A | |||||
Y67H2A.7a.1:c.597-139T>A | |||||
Y67H2A.7b.4:c.-218T>A | |||||
HGVSg | CHROMOSOME_IV:g.13307199T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y67H2A | |
Flanking_sequences | gcgcgccgaggtgtgtcgttttttg | tttttcaatgttttttttagggaaa | |||
Mapping_target | Y67H2A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00575191 | |||
Status | Live | ||||
Affects | Gene | WBGene00013464 | |||
Transcript | Y67H2A.7b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y67H2A.7b.2:c.-79-139T>A | ||||
Intron_number | 2/8 | ||||
Y67H2A.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67H2A.7b.1:c.-79-139T>A | ||||
Intron_number | 3/9 | ||||
Y67H2A.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67H2A.7a.1:c.597-139T>A | ||||
Intron_number | 5/10 | ||||
Y67H2A.7b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67H2A.7b.3:c.-79-139T>A | ||||
Intron_number | 1/7 | ||||
Y67H2A.7b.4 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67H2A.7b.4:c.-218T>A | ||||
cDNA_position | 87 | ||||
Exon_number | 1/7 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw60617 | ||||
Method | WGS_Hawaiian_Waterston |