WormBase Tree Display for Variation: WBVar00192415
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WBVar00192415 | Name | Public_name | WBVar00192415 | ||
---|---|---|---|---|---|
Other_name | haw59691 | ||||
cewivar00209566 | |||||
CE40479:p.Trp159Ter | |||||
Y39C12A.9.1:c.477G>A | |||||
HGVSg | CHROMOSOME_IV:g.12257942C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y39C12A | |
Flanking_sequences | ttttaaaaaagaatacagttacagt | caccgaatcagaaacatagcagcac | |||
Mapping_target | Y39C12A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012710 | |||
Transcript | Y39C12A.9.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | Y39C12A.9.1:c.477G>A | ||||
HGVSp | CE40479:p.Trp159Ter | ||||
cDNA_position | 496 | ||||
CDS_position | 477 | ||||
Protein_position | 159 | ||||
Exon_number | 4/5 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
Remark | [20081124 db] this Variation was previously named hw59691 | ||||
Method | WGS_Hawaiian_Waterston |