WormBase Tree Display for Variation: WBVar00191665
expand all nodes | collapse all nodes | view schema
| WBVar00191665 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00191665 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_IV:g.10165192T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T14G10 | |
| Flanking_sequences | ttttgaagaaattaatttttttgtt | tctggtcaaaacttttttgggtaca | |||
| Mapping_target | T14G10 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00574045 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004254 | |||
| Transcript | T14G10.2d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2d.1:c.3693-183A>C | ||||
| Intron_number | 11/12 | ||||
| T14G10.2b.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2b.3:c.*309-183A>C | ||||
| Intron_number | 16/16 | ||||
| T14G10.2b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2b.2:c.*210-183A>C | ||||
| Intron_number | 17/18 | ||||
| T14G10.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2b.1:c.*309-183A>C | ||||
| Intron_number | 17/18 | ||||
| T14G10.2b.5 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2b.5:c.*263-183A>C | ||||
| Intron_number | 17/18 | ||||
| T14G10.2e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2e.1:c.3567-183A>C | ||||
| Intron_number | 9/10 | ||||
| T14G10.2b.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2b.4:c.*194-183A>C | ||||
| Intron_number | 16/17 | ||||
| T14G10.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T14G10.2a.1:c.4062-183A>C | ||||
| Intron_number | 15/17 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw58941 | ||||
| Method | WGS_Hawaiian_Waterston |
