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WormBase Tree Display for Variation: WBVar00190939

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Name Class

WBVar00190939EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00190939
Other_namehaw58215
haw153730
cewivar00207842
CE33870:p.Lys505=
Y42H9B.2.1:c.1515G>A
HGVSgCHROMOSOME_IV:g.7999740C>T
Sequence_detailsSMapS_parentSequenceY42H9B
Flanking_sequencesctaatccatcatttgtcaaatcatattcacattatccgtctgaatttcat
Mapping_targetY42H9B
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00573595
StatusLive
AffectsGeneWBGene00004371
TranscriptY42H9B.2.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY42H9B.2.1:c.1515G>A
HGVSpCE33870:p.Lys505=
cDNA_position1590
CDS_position1515
Protein_position505
Exon_number7/14
Codon_changeaaG/aaA
Amino_acid_changeK
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw58215
MethodWGS_Hawaiian_Waterston