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WormBase Tree Display for Variation: WBVar00190710

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Name Class

WBVar00190710EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00190710
Other_namesnp_R05G6[9]
haw57986
cewivar00207566
R05G6.10e.1:c.48+1684C>A
R05G6.10d.1:c.177+1684C>A
R05G6.10c.1:c.222+1684C>A
HGVSgCHROMOSOME_IV:g.7526906G>T
Sequence_detailsSMapS_parentSequenceR05G6
Flanking_sequencesctgcacctttaaacgcactttctcaaagaacaatgttcaccgtataagga
Mapping_targetR05G6
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00245813
StatusLive
AffectsGeneWBGene00019902
TranscriptR05G6.10e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05G6.10e.1:c.48+1684C>A
Intron_number1/9
R05G6.10c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05G6.10c.1:c.222+1684C>A
Intron_number3/12
R05G6.10d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05G6.10d.1:c.177+1684C>A
Intron_number2/10
ReferenceWBPaper00004703
Remark[20081124 db] this Variation was previously named hw57986
MethodWGS_Hawaiian_Waterston