WormBase Tree Display for Variation: WBVar00190273
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| WBVar00190273 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00190273 | |||
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_IV:g.6848169T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | R13H7 | |
| Flanking_sequences | ctgaattctacggatactatagaag | agcggaaaaaacaaagaaattgctc | |||
| Mapping_target | R13H7 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01452942 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00020069 | |||
| Transcript | R13H7.2h.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2h.1:c.1157+68A>C | ||||
| Intron_number | 9/10 | ||||
| R13H7.2e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2e.1:c.1083+139A>C | ||||
| Intron_number | 9/10 | ||||
| R13H7.2c.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2c.2:c.1068+139A>C | ||||
| Intron_number | 10/12 | ||||
| R13H7.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2d.1:c.1104+139A>C | ||||
| Intron_number | 10/11 | ||||
| R13H7.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2b.1:c.1086+139A>C | ||||
| Intron_number | 10/12 | ||||
| R13H7.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2c.1:c.1068+139A>C | ||||
| Intron_number | 10/12 | ||||
| R13H7.2g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2g.1:c.1154+68A>C | ||||
| Intron_number | 10/12 | ||||
| R13H7.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2a.1:c.1182+139A>C | ||||
| Intron_number | 10/12 | ||||
| R13H7.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2i.1:c.1253+68A>C | ||||
| Intron_number | 9/10 | ||||
| R13H7.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2f.1:c.1175+68A>C | ||||
| Intron_number | 9/11 | ||||
| Reference | WBPaper00040707 | ||||
| Remark | [20081124 db] this Variation was previously named hw57549 | ||||
| Method | WGS_Hawaiian_Waterston |
