WormBase Tree Display for Variation: WBVar00189006
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| WBVar00189006 | Name | Public_name | WBVar00189006 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_IV:g.5343759G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y4C6B | |
| Flanking_sequences | tggacggccaattgttttgattaaa | tttttgtgaataagaaaatgttttg | |||
| Mapping_target | Y4C6B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (20) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021156 | |||
| Transcript | Y4C6B.2b.7 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.7:c.425+33G>A | ||||
| Intron_number | 7/8 | ||||
| Y4C6B.2b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.2:c.425+33G>A | ||||
| Intron_number | 7/8 | ||||
| Y4C6B.2b.6 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.6:c.425+33G>A | ||||
| Intron_number | 5/6 | ||||
| Y4C6B.2b.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.3:c.425+33G>A | ||||
| Intron_number | 6/7 | ||||
| Y4C6B.2a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2a.2:c.1349+33G>A | ||||
| Intron_number | 7/8 | ||||
| Y4C6B.2b.5 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.5:c.425+33G>A | ||||
| Intron_number | 7/8 | ||||
| Y4C6B.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.1:c.425+33G>A | ||||
| Intron_number | 8/9 | ||||
| Y4C6B.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2a.1:c.1349+33G>A | ||||
| Intron_number | 6/7 | ||||
| Y4C6B.2b.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y4C6B.2b.4:c.425+33G>A | ||||
| Intron_number | 7/8 | ||||
| Remark | [20081124 db] this Variation was previously named hw56282 | ||||
| Method | WGS_Hawaiian_Waterston |
