WormBase Tree Display for Variation: WBVar00188746

WBVar00188746 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00188746
    Other_name: haw56022
      haw152450
      cewivar00205760
      F19C7.8a.1:c.695-1612C>T
      F19C7.8b.1:c.284-1612C>T
      F19C7.8e.1:c.716-1612C>T
      F19C7.8d.1:c.386-1612C>T
    HGVSg: CHROMOSOME_IV:g.4614875G>A
  Sequence_details: SMap: S_parent: Sequence: F19C7
    Flanking_sequences: ctcccccattcacacctaccttgaa ttttttatacaagaaataggtgctg
    Mapping_target: F19C7
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00572315
    Status: Live
  Affects: Gene: WBGene00017597
    Transcript: F19C7.8d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F19C7.8d.1:c.386-1612C>T
        Intron_number: 4/8
      F19C7.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F19C7.8a.1:c.695-1612C>T
        Intron_number: 3/8
      F19C7.8b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F19C7.8b.1:c.284-1612C>T
        Intron_number: 3/7
      F19C7.8e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F19C7.8e.1:c.716-1612C>T
        Intron_number: 5/10
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw56022
  Method: WGS_Hawaiian_Waterston