WormBase Tree Display for Variation: WBVar00188685
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WBVar00188685 | Name | Public_name | WBVar00188685 | ||
---|---|---|---|---|---|
Other_name | haw55961 | ||||
cewivar00038813 | |||||
W03B1.7c.1:c.-536-123G>A | |||||
W03B1.7a.1:c.135-123G>A | |||||
W03B1.7c.2:c.-575-123G>A | |||||
W03B1.7b.1:c.135-123G>A | |||||
HGVSg | CHROMOSOME_IV:g.4337355G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W03B1 | |
Flanking_sequences | caaacaaatagataaatgttcggaa | ttatggaaaatttgaaaattttcga | |||
Mapping_target | W03B1 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020976 | |||
Transcript | W03B1.7b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W03B1.7b.1:c.135-123G>A | ||||
Intron_number | 1/10 | ||||
W03B1.7c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03B1.7c.2:c.-575-123G>A | ||||
Intron_number | 1/10 | ||||
W03B1.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03B1.7c.1:c.-536-123G>A | ||||
Intron_number | 1/11 | ||||
W03B1.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03B1.7a.1:c.135-123G>A | ||||
Intron_number | 2/11 | ||||
Remark | [20081124 db] this Variation was previously named hw55961 | ||||
Method | WGS_Hawaiian_Waterston |