WormBase Tree Display for Variation: WBVar00188678

WBVar00188678 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00188678
    Other_name: haw55954
      haw152402
      cewivar00038803
      W03B1.3.1:c.-892A>C
      W03B1.3.3:c.-63+624A>C
      W03B1.3.2:c.-30+624A>C
      W03B1.1:n.337T>G
    HGVSg: CHROMOSOME_IV:g.4334589T>G
  Sequence_details: SMap: S_parent: Sequence: W03B1
    Flanking_sequences: gcatgagaagaaggttcggacgcag tggaaaacctcaagctacttaccaa
    Mapping_target: W03B1
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000032 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00572267
    Status: Live
  Affects: Gene: WBGene00020973
      WBGene00020971
    Transcript: W03B1.3.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.3.3:c.-63+624A>C
        Intron_number: 1/6
      W03B1.3.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.3.2:c.-30+624A>C
        Intron_number: 1/6
      W03B1.3.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.3.1:c.-892A>C
        cDNA_position: 1651
        Exon_number: 1/6
    Pseudogene: W03B1.1 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.1:n.337T>G
        cDNA_position: 337
        Exon_number: 1/2
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw55954
  Method: WGS_Hawaiian_Waterston