WormBase Tree Display for Variation: WBVar00188287

WBVar00188287 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00188287
    Other_name: haw55563
      haw152085
      cewivar00205368
      W02C12.3j.1:c.27+1657C>T
      W02C12.3d.2:c.-1+1657C>T
      W02C12.3i.1:c.27+1657C>T
    HGVSg: CHROMOSOME_IV:g.4033101G>A
  Sequence_details: SMap: S_parent: Sequence: F35F11
    Flanking_sequences: taacaaataatttgtagcaaatttt cgtagactattttgttagttgaaac
    Mapping_target: F35F11
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00571950
    Status: Live
  Affects: Gene: WBGene00020930
    Transcript: W02C12.3j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W02C12.3j.1:c.27+1657C>T
        Intron_number: 1/9
      W02C12.3i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W02C12.3i.1:c.27+1657C>T
        Intron_number: 1/10
      W02C12.3d.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W02C12.3d.2:c.-1+1657C>T
        Intron_number: 1/11
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw55563
  Method: WGS_Hawaiian_Waterston